Reporting delays and right-truncation of line list dataUpdated 2 days ago

Joshua W. Lambert

Rendered from reporting-delays-truncation.Rmd in simulist 0.4.0.9000.
Visualising simulated dataUpdated 2 days ago

Joshua W. Lambert

Rendered from vis-linelist.Rmd in simulist 0.4.0.9000.
Wrangling simulated outbreak dataUpdated 2 days ago

Joshua W. Lambert

Rendered from wrangling-linelist.Rmd in simulist 0.4.0.9000.
Design Principles for {simulist}Updated 3 days ago

Joshua W. Lambert

Rendered from design-principles.Rmd in simulist 0.4.0.9000.
Age-structured populationUpdated 10 days ago

Joshua W. Lambert

Rendered from age-struct-pop.Rmd in simulist 0.4.0.9000.
DAISIE FAQsUpdated 24 days ago

Joshua W. Lambert

Rendered from DAISIE_FAQs.Rmd in DAISIEprep 1.0.0.
Design Principles for {superspreading}Updated 25 days ago

Joshua W. Lambert

Rendered from design-principles.Rmd in superspreading 0.3.0.
Epidemic RiskUpdated 25 days ago

Joshua W. Lambert

Rendered from epidemic_risk.Rmd in superspreading 0.3.0.
Estimate individual-level transmissionUpdated 25 days ago

Joshua W. Lambert

Rendered from estimate_individual_level_transmission.Rmd in superspreading 0.3.0.
Getting started with {superspreading}Updated 25 days ago

Joshua W. Lambert

Rendered from superspreading.Rmd in superspreading 0.3.0.
Methods for calculating the proportion of transmissionUpdated 25 days ago

Joshua W. Lambert

Rendered from proportion_transmission.Rmd in superspreading 0.3.0.
Outbreaks in heterogeneous networksUpdated 25 days ago

Joshua W. Lambert

Rendered from heterogeneous_network_outbreaks.Rmd in superspreading 0.3.0.
Age-stratified hospitalisation and death risksUpdated 1 months ago

Joshua W. Lambert

Rendered from age-strat-risks.Rmd in simulist 0.4.0.9000.
Getting Started with {simulist}Updated 1 months ago

Joshua W. Lambert

Rendered from simulist.Rmd in simulist 0.4.0.9000.
Time-varying case fatality riskUpdated 1 months ago

Joshua W. Lambert

Rendered from time-varying-cfr.Rmd in simulist 0.4.0.9000.
Data Collation and Synthesis ProtocolUpdated 1 months ago

Joshua W. Lambert

Rendered from data_protocol.Rmd in epiparameter 0.4.1.9000.
Extracting species with multiple tips in the phylogenyUpdated 2 months ago

Joshua W. Lambert

Rendered from Multi_tip_extraction.Rmd in DAISIEprep 1.0.0.
DAISIEprep TutorialUpdated 2 months ago

Joshua W. Lambert

Rendered from Tutorial.Rmd in DAISIEprep 1.0.0.
Forcing non-endemic singletons: solutions and limitationsUpdated 2 months ago

Joshua W. Lambert

Rendered from Forcing_nonendemic_singleton.Rmd in DAISIEprep 1.0.0.
Design Principles for {epiparameter}Updated 3 months ago

Joshua W. Lambert

Rendered from design_principles.Rmd in epiparameter 0.4.1.9000.
Design Principles for {superspreading}Updated 4 months ago

Joshua W. Lambert

Rendered from design-principles.Rmd in superspreading 0.3.0.9000.
Current databaseUpdated 4 months ago

Joshua W. Lambert

Rendered from database.Rmd in epiparameterDB 0.1.0.9000.
Design Principles for {epiparameterDB}Updated 4 months ago

Joshua W. Lambert

Rendered from design-principles.Rmd in epiparameterDB 0.1.0.9000.
Getting started with {superspreading}Updated 4 months ago

Joshua W. Lambert

Rendered from superspreading.Rmd in superspreading 0.3.0.9000.
Methods for calculating the proportion of transmissionUpdated 4 months ago

Joshua W. Lambert

Rendered from proportion_transmission.Rmd in superspreading 0.3.0.9000.
Current databaseUpdated 5 months ago

Joshua W. Lambert

Rendered from database.Rmd in epiparameter 0.4.1.9000.
Getting Started with {epiparameter}Updated 5 months ago

Joshua W. Lambert

Rendered from epiparameter.Rmd in epiparameter 0.4.1.9000.
Parameter extraction and conversion in {epiparameter}Updated 5 months ago

Joshua W. Lambert

Rendered from extract_convert.Rmd in epiparameter 0.4.1.9000.
Epidemic RiskUpdated 5 months ago

Joshua W. Lambert

Rendered from epidemic_risk.Rmd in superspreading 0.3.0.9000.
Estimate individual-level transmissionUpdated 5 months ago

Joshua W. Lambert

Rendered from estimate_individual_level_transmission.Rmd in superspreading 0.3.0.9000.
Outbreaks in heterogeneous networksUpdated 5 months ago

Joshua W. Lambert

Rendered from heterogeneous_network_outbreaks.Rmd in superspreading 0.3.0.9000.
PerformanceUpdated 2 years ago

Joshua W. Lambert

Rendered from Performance.Rmd in DAISIEprep 1.0.0.
SensitivityUpdated 2 years ago

Joshua W. Lambert

Rendered from Sensitivity.Rmd in DAISIEprep 1.0.0.